usefragsph not on
There are 33 ligand heavy atoms
Ligand center of coords (x y z): -2.54409090909091 7.78672727272727 14.3210909090909
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 770
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 530
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 524
Number of spheres polar: 114, nonpolar: 274, out of current total: 524
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.37342 7.40371 -2.13035 17.57256 4.33307 23.98258
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 310
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 287
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 251
Spheres center of coords (x y z): -4.02445689243028 6.47714589641435 12.5900721912351
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.66154320555262
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 37
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 33