There are 16 ligand heavy atoms Ligand center of coords (x y z): -4.6209375 3.2704375 14.9874375 useligsph not on Starting number of spheres from sph/sph cluster 0: 605 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 433 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 427 Number of spheres polar: 90, nonpolar: 232, out of current total: 427 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -15.12568 7.18185 -8.68586 14.56863 4.23284 23.30781 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 164 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 140 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -4.6209375 3.2704375 14.9874375 Center point: 105 xyz: -4.23835 2.72164 14.73413 After continuity checking, number of spheres is: 122 Spheres center of coords (x y z): -3.98260254098361 5.06893663934426 11.7002351639344 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -9.70123726758287 -2.17949393694422 15.8753872271625 Average weighted-distance for final elimination is: 22.4033682643505 Final number of output spheres is: 120 Number of polar spheres: 22 Number of nonpolar spheres: 57 Number of spheres that are near neither polar nor nonpolar receptor atoms: 41 Final number of spheres that are from crystallographic ligand: 0