usefragsph not on
There are 16 ligand heavy atoms
Ligand center of coords (x y z): -4.6209375 3.2704375 14.9874375
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 605
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 409
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 404
Number of spheres polar: 67, nonpolar: 238, out of current total: 404
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.44845 5.20618 -6.36446 12.26638 5.97812 23.30781
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 220
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 198
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 190
Spheres center of coords (x y z): -4.191098 4.99949715789474 11.9582638947368
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.92565561259843
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 40
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 16