There are 13 ligand heavy atoms Ligand center of coords (x y z): -5.39176923076923 3.077 15.2529230769231 useligsph not on Starting number of spheres from sph/sph cluster 0: 684 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 492 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 483 Number of spheres polar: 95, nonpolar: 284, out of current total: 483 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -17.23224 6.57633 -8.76143 14.87854 4.37695 26.89895 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 185 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 147 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -5.39176923076923 3.077 15.2529230769231 Center point: 115 xyz: -5.25779 3.26406 14.76182 After continuity checking, number of spheres is: 112 Final number of output spheres is: 112 Number of polar spheres: 19 Number of nonpolar spheres: 58 Number of spheres that are near neither polar nor nonpolar receptor atoms: 35 Final number of spheres that are from crystallographic ligand: 0