usefragsph not on
There are 16 ligand heavy atoms
Ligand center of coords (x y z): -2.92 6.1884375 14.26675
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 676
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 488
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 486
Number of spheres polar: 130, nonpolar: 247, out of current total: 486
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.74073 6.87400 -3.32895 16.18088 4.45063 24.21602
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 278
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 246
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 198
Spheres center of coords (x y z): -4.5508952020202 6.21887949494949 11.9505356060606
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.23249540693696
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 39
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 16