There are 13 ligand heavy atoms Ligand center of coords (x y z): -4.18661538461538 3.74376923076923 15.0217692307692 useligsph not on Starting number of spheres from sph/sph cluster 0: 539 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 388 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 384 Number of spheres polar: 78, nonpolar: 191, out of current total: 384 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.23995 7.75289 -7.52235 15.44566 4.43291 26.87943 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 150 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 125 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -4.18661538461538 3.74376923076923 15.0217692307692 Center point: 88 xyz: -3.16051 2.96995 15.46075 After continuity checking, number of spheres is: 94 Final number of output spheres is: 94 Number of polar spheres: 16 Number of nonpolar spheres: 40 Number of spheres that are near neither polar nor nonpolar receptor atoms: 38 Final number of spheres that are from crystallographic ligand: 0