There are 20 ligand heavy atoms Ligand center of coords (x y z): -3.5091 6.7198 14.0855 useligsph not on Starting number of spheres from sph/sph cluster 0: 630 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 423 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 418 Number of spheres polar: 81, nonpolar: 226, out of current total: 418 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.37052 7.27050 -5.24984 18.40991 4.30583 26.01088 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 161 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 135 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -3.5091 6.7198 14.0855 Center point: 79 xyz: -3.39892 6.05366 14.03711 After continuity checking, number of spheres is: 91 Final number of output spheres is: 91 Number of polar spheres: 16 Number of nonpolar spheres: 39 Number of spheres that are near neither polar nor nonpolar receptor atoms: 36 Final number of spheres that are from crystallographic ligand: 0