There are 10 ligand heavy atoms Ligand center of coords (x y z): -5.7583 2.3655 15.9307 useligsph not on Starting number of spheres from sph/sph cluster 0: 587 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 434 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 428 Number of spheres polar: 91, nonpolar: 237, out of current total: 428 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.04141 5.92113 -7.86835 11.47894 4.34541 24.61906 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 159 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 133 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -5.7583 2.3655 15.9307 Center point: 60 xyz: -5.29593 2.29927 15.93123 After continuity checking, number of spheres is: 121 Spheres center of coords (x y z): -2.58851355371901 4.03577454545454 11.5545462809917 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -9.61950261991134 -1.86765900846433 15.9789064893188 Average weighted-distance for final elimination is: 24.3181818939832 Final number of output spheres is: 120 Number of polar spheres: 21 Number of nonpolar spheres: 61 Number of spheres that are near neither polar nor nonpolar receptor atoms: 38 Final number of spheres that are from crystallographic ligand: 0