There are 33 ligand heavy atoms Ligand center of coords (x y z): -2.79533333333333 3.63063636363636 11.997 useligsph not on Starting number of spheres from sph/sph cluster 0: 1013 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 721 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 714 Number of spheres polar: 131, nonpolar: 413, out of current total: 714 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.06455 9.10842 -8.36623 15.27916 0.12685 23.77015 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 248 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 210 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -2.79533333333333 3.63063636363636 11.997 Center point: 87 xyz: -4.10921 3.27115 12.30915 After continuity checking, number of spheres is: 131 Spheres center of coords (x y z): -3.65974717557252 6.11502671755725 11.6855824427481 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -9.48460590137431 -1.69287388843977 15.718715440582 Average weighted-distance for final elimination is: 22.8081496485523 Final number of output spheres is: 120 Number of polar spheres: 24 Number of nonpolar spheres: 57 Number of spheres that are near neither polar nor nonpolar receptor atoms: 39 Final number of spheres that are from crystallographic ligand: 0