usefragsph not on
There are 12 ligand heavy atoms
Ligand center of coords (x y z): 15.8214166666667 4.75491666666667 15.45275
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 735
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 490
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 479
Number of spheres polar: 94, nonpolar: 268, out of current total: 479
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.01199 25.74903 -4.00867 14.54364 5.50956 24.84664
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 173
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 137
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 128
Spheres center of coords (x y z): 17.41077625 7.53743578125 11.37537828125
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.44458581664347
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 12