There are 23 ligand heavy atoms Ligand center of coords (x y z): -3.45321739130435 5.83269565217391 14.1569565217391 useligsph not on Starting number of spheres from sph/sph cluster 0: 754 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 497 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 484 Number of spheres polar: 104, nonpolar: 262, out of current total: 484 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.51026 7.07888 -6.00763 17.38586 4.52224 25.81047 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 175 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 146 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -3.45321739130435 5.83269565217391 14.1569565217391 Center point: 84 xyz: -3.48251 6.53115 14.74300 After continuity checking, number of spheres is: 98 Final number of output spheres is: 98 Number of polar spheres: 18 Number of nonpolar spheres: 45 Number of spheres that are near neither polar nor nonpolar receptor atoms: 35 Final number of spheres that are from crystallographic ligand: 0