usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): -3.19970833333333 6.19791666666667 14.3782916666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 682
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 453
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 446
Number of spheres polar: 89, nonpolar: 257, out of current total: 446
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.49667 6.77617 -3.71496 15.93067 5.13575 24.35453
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 262
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 225
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 175
Spheres center of coords (x y z): -3.95381548571428 5.02374051428571 12.0465640571429
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.16754510907159
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 38
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 24