There are 25 ligand heavy atoms Ligand center of coords (x y z): -3.36484 3.87136 13.85088 useligsph not on Starting number of spheres from sph/sph cluster 0: 677 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 481 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 472 Number of spheres polar: 93, nonpolar: 270, out of current total: 472 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.14555 7.64887 -7.76202 13.54763 3.11994 24.91009 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 166 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 136 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -3.36484 3.87136 13.85088 Center point: 112 xyz: -2.95006 4.12739 14.26897 After continuity checking, number of spheres is: 102 Final number of output spheres is: 102 Number of polar spheres: 19 Number of nonpolar spheres: 46 Number of spheres that are near neither polar nor nonpolar receptor atoms: 37 Final number of spheres that are from crystallographic ligand: 0