usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): -4.80604347826087 5.59369565217391 13.2384347826087
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 759
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 481
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 475
Number of spheres polar: 110, nonpolar: 278, out of current total: 475
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.99413 4.79748 -4.30914 15.57362 5.14585 22.94121
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 263
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 229
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 203
Spheres center of coords (x y z): -4.16728650246305 5.19347901477832 11.5641761576355
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.12206988773135
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 23