usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 33.9856071428571 36.5345357142857 32.6792142857143
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1070
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 630
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 616
Number of spheres polar: 261, nonpolar: 224, out of current total: 616
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 24.00197 43.94269 26.67423 46.28242 22.68651 42.63966
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 314
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 273
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 233
Spheres center of coords (x y z): 34.2278438626609 38.5637562660944 31.6340195708154
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.53807426813923
Final number of output spheres is: 60
Number of polar spheres: 30
Number of nonpolar spheres: 18
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 28