usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): -46.798037037037 15.02 -21.9013333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2058
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1132
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1130
Number of spheres polar: 325, nonpolar: 458, out of current total: 1130
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -56.77547 -36.88281 5.18460 24.96251 -31.82869 -11.94366
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 374
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 319
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 299
Spheres center of coords (x y z): -46.1441990635452 13.4129635451505 -23.5810927424749
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.47449293536227
Final number of output spheres is: 45
Number of polar spheres: 12
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 27