usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): -46.1484285714286 14.9692857142857 -22.0372857142857
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1884
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1159
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1156
Number of spheres polar: 399, nonpolar: 423, out of current total: 1156
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -56.07248 -36.17150 5.10327 24.93671 -32.02814 -12.06358
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 616
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 533
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 497
Spheres center of coords (x y z): -45.1665241649899 13.7621331589537 -23.2552057746479
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.29317605842268
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 18
Final number of spheres that are from crystallographic ligand: 28