usefragsph not on
There are 18 ligand heavy atoms
Ligand center of coords (x y z): 1.16161111111111 28.3933333333333 8.56983333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1254
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 747
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 747
Number of spheres polar: 262, nonpolar: 351, out of current total: 747
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -8.58742 11.14063 18.42107 38.36981 -1.39800 18.53969
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 257
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 207
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 166
Spheres center of coords (x y z): 3.26235837349398 24.6477720481928 8.95686632530121
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.98249740291425
Final number of output spheres is: 45
Number of polar spheres: 15
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 18