usefragsph not on
There are 18 ligand heavy atoms
Ligand center of coords (x y z): 1.17655555555556 27.6003888888889 8.76816666666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1268
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 887
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 887
Number of spheres polar: 325, nonpolar: 408, out of current total: 887
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -8.81039 11.17619 17.68275 37.56298 -1.20084 18.74115
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 479
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 403
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 333
Spheres center of coords (x y z): 3.33734492492492 23.9237178078078 8.18646348348349
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.76924064134873
Final number of output spheres is: 60
Number of polar spheres: 24
Number of nonpolar spheres: 34
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 18