usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 6.14847826086957 9.569 26.4267826086957
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1385
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 835
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 832
Number of spheres polar: 280, nonpolar: 374, out of current total: 832
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -3.81141 16.12282 -0.30216 19.56275 16.45600 36.35431
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 438
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 383
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 296
Spheres center of coords (x y z): 9.0273560472973 9.39714320945946 24.9721538851351
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.69845932658435
Final number of output spheres is: 60
Number of polar spheres: 22
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 23