usefragsph not on
There are 30 ligand heavy atoms
Ligand center of coords (x y z): 1.96986666666667 27.5588 8.82486666666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1615
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1009
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 997
Number of spheres polar: 328, nonpolar: 447, out of current total: 997
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.92617 11.53265 17.59708 37.51972 -1.12428 18.80296
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 561
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 484
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 413
Spheres center of coords (x y z): 0.533708547215496 25.1172046004842 10.0445191767555
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.26178807041411
Final number of output spheres is: 60
Number of polar spheres: 39
Number of nonpolar spheres: 18
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 30