usefragsph not on
There are 18 ligand heavy atoms
Ligand center of coords (x y z): 1.11622222222222 28.6548888888889 9.12244444444444
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1225
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 835
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 835
Number of spheres polar: 289, nonpolar: 356, out of current total: 835
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -8.85267 11.08770 18.71208 38.64900 -0.85747 19.10229
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 285
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 228
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 184
Spheres center of coords (x y z): 2.70261190217391 25.3553580434783 8.78863032608695
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.47145161913944
Final number of output spheres is: 45
Number of polar spheres: 17
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 18