There are 25 ligand heavy atoms Ligand center of coords (x y z): 6.09468 44.21312 51.13016 useligsph not on Starting number of spheres from sph/sph cluster 0: 1074 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 876 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 876 Number of spheres polar: 233, nonpolar: 402, out of current total: 876 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.63141 18.07449 32.23056 56.13406 39.13379 62.78228 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 319 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 273 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 6.09468 44.21312 51.13016 Center point: 233 xyz: 6.26493 44.52322 50.99578 After continuity checking, number of spheres is: 237 Spheres center of coords (x y z): 4.35099362869198 41.9010361603375 49.4293546835443 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 12.0833717294193 46.7580813656667 57.8968860880663 Average weighted-distance for final elimination is: 32.169791036856 Final number of output spheres is: 120 Number of polar spheres: 55 Number of nonpolar spheres: 45 Number of spheres that are near neither polar nor nonpolar receptor atoms: 20 Final number of spheres that are from crystallographic ligand: 0