There are 13 ligand heavy atoms Ligand center of coords (x y z): 7.08269230769231 45.8675384615385 51.6048461538462 useligsph not on Starting number of spheres from sph/sph cluster 0: 1122 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 899 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 899 Number of spheres polar: 385, nonpolar: 334, out of current total: 899 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.74806 19.07328 33.91708 57.00932 39.73705 62.77462 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 324 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 257 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 7.08269230769231 45.8675384615385 51.6048461538462 Center point: 229 xyz: 6.86226 45.86168 51.54902 After continuity checking, number of spheres is: 186 Spheres center of coords (x y z): 2.41758940860215 45.7716566129032 52.7806856451613 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 9.59628762677486 46.8359724137932 59.5890851926979 Average weighted-distance for final elimination is: 27.4424999539705 Final number of output spheres is: 120 Number of polar spheres: 56 Number of nonpolar spheres: 35 Number of spheres that are near neither polar nor nonpolar receptor atoms: 29 Final number of spheres that are from crystallographic ligand: 0