usefragsph not on
There are 13 ligand heavy atoms
Ligand center of coords (x y z): 7.08269230769231 45.8675384615385 51.6048461538462
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1122
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 734
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 734
Number of spheres polar: 305, nonpolar: 297, out of current total: 734
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -2.89412 17.07501 37.14904 55.86064 41.69135 61.45236
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 234
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 193
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 167
Spheres center of coords (x y z): 2.93462191616767 45.5439165269461 52.2344811377246
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.14607216220765
Final number of output spheres is: 45
Number of polar spheres: 18
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 13