usefragsph not on
There are 17 ligand heavy atoms
Ligand center of coords (x y z): 12.2291176470588 45.6071764705882 23.9356470588235
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1365
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 755
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 753
Number of spheres polar: 259, nonpolar: 336, out of current total: 753
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 2.41851 20.73275 35.63654 55.59163 13.97654 33.88323
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 431
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 378
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 306
Spheres center of coords (x y z): 10.7454859150327 45.0295596732026 27.9140696405229
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.03900494205076
Final number of output spheres is: 60
Number of polar spheres: 31
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 17