usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): -11.29916 205.4308408 113.57244
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1539
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 734
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 734
Number of spheres polar: 231, nonpolar: 349, out of current total: 734
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -21.29574 -1.30131 195.54337 215.39745 103.57273 123.56185
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 239
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 202
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 189
Spheres center of coords (x y z): -10.9999052910053 204.713397407408 116.839762275132
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.26479146692464
Final number of output spheres is: 45
Number of polar spheres: 21
Number of nonpolar spheres: 19
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 25