usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 11.75475 -9.606875 9.985625
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1612
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 991
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 991
Number of spheres polar: 412, nonpolar: 440, out of current total: 991
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 1.77887 21.74121 -19.60361 0.38649 0.02873 19.98225
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 495
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 417
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 353
Spheres center of coords (x y z): 11.6424911048159 -7.66731575070822 6.36095702549575
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.62890585538032
Final number of output spheres is: 60
Number of polar spheres: 35
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 24