usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 11.3873571428571 -9.35892857142857 9.81535714285714
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1857
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 913
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 913
Number of spheres polar: 395, nonpolar: 292, out of current total: 913
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 1.46772 21.33881 -19.30491 0.63673 -0.18200 19.80488
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 523
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 442
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 387
Spheres center of coords (x y z): 11.215979379845 -7.86044829457365 6.61206511627907
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.93870339143432
Final number of output spheres is: 60
Number of polar spheres: 31
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 28