usefragsph not on
There are 30 ligand heavy atoms
Ligand center of coords (x y z): 1.1567 28.4499666666667 8.53856666666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1846
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 964
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 964
Number of spheres polar: 294, nonpolar: 448, out of current total: 964
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -8.80856 11.14122 18.46712 38.42144 -1.39400 18.52526
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 557
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 477
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 395
Spheres center of coords (x y z): 1.13091567088607 25.175590835443 9.62282407594936
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.94307199306839
Final number of output spheres is: 60
Number of polar spheres: 22
Number of nonpolar spheres: 37
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 30