usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): 1.62476923076923 48.3823846153846 2.5115
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1185
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 655
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 655
Number of spheres polar: 212, nonpolar: 251, out of current total: 655
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -8.30475 11.47432 38.40177 58.35109 -5.32534 12.29341
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 227
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 196
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 169
Spheres center of coords (x y z): -1.07655420118343 45.866370295858 2.1448075739645
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.97065896066541
Final number of output spheres is: 45
Number of polar spheres: 21
Number of nonpolar spheres: 18
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 26