usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 38.2237916666667 20.0688333333333 -1.472
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1369
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 743
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 742
Number of spheres polar: 188, nonpolar: 339, out of current total: 742
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 28.54133 48.17732 10.07834 30.03130 -11.43860 8.48861
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 419
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 362
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 341
Spheres center of coords (x y z): 40.2523992375367 22.2905171847507 -2.3014284457478
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.72048305827339
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 24