name of input pdb file: rec.crg name of output contact grid file: solvmap_sev atomic radii (A): 1. for O N C S P Other [1.4 1.3 1.7 2.22.2 1.8]? 1.600000 1.650000 1.900000 1.900000 1.900000 1.600000 2. for water probe (exclusion) [1.4]? 1.400000 number of grid points/angstrom?(1-4) 2 pdb file of limiting box: box assumed ligand atomic radius (A): 1.400000 maximum receptor atomic radius (A): 1.900000 grid resolution (A): 0.5000000 integration cutoff (A): 10.00000 receptor minimum and maximum x y z (A): 1.596000 -14.78300 30.15900 51.23100 25.81500 82.92800 box minimum and maximum x y z (A): 6.460000 -10.75500 42.04700 49.70600 20.85500 83.86200 dielectric grid expansion size (points/edge) 16 15 20 10 17 5 dielectric grid minimum and maximum x y z (A): -1.540000 -18.25500 32.04700 54.70600 29.35500 86.36200 solvation grid x, y, z dimensions: 86 63 83 finished receptor accessible surface finished initializing dielectric grid finished creating receptor molecular surface grid dV is 9.9471835E-03 Precalculating solvmap lookup table Starting solvmap calculation. 1 / 84 the way there! 2 / 84 the way there! 3 / 84 the way there! 4 / 84 the way there! 5 / 84 the way there! 6 / 84 the way there! 7 / 84 the way there! 8 / 84 the way there! 9 / 84 the way there! 10 / 84 the way there! 11 / 84 the way there! 12 / 84 the way there! 13 / 84 the way there! 14 / 84 the way there! 15 / 84 the way there! 16 / 84 the way there! 17 / 84 the way there! 18 / 84 the way there! 19 / 84 the way there! 20 / 84 the way there! 21 / 84 the way there! 22 / 84 the way there! 23 / 84 the way there! 24 / 84 the way there! 25 / 84 the way there! 26 / 84 the way there! 27 / 84 the way there! 28 / 84 the way there! 29 / 84 the way there! 30 / 84 the way there! 31 / 84 the way there! 32 / 84 the way there! 33 / 84 the way there! 34 / 84 the way there! 35 / 84 the way there! 36 / 84 the way there! 37 / 84 the way there! 38 / 84 the way there! 39 / 84 the way there! 40 / 84 the way there! 41 / 84 the way there! 42 / 84 the way there! 43 / 84 the way there! 44 / 84 the way there! 45 / 84 the way there! 46 / 84 the way there! 47 / 84 the way there! 48 / 84 the way there! 49 / 84 the way there! 50 / 84 the way there! 51 / 84 the way there! 52 / 84 the way there! 53 / 84 the way there! 54 / 84 the way there! 55 / 84 the way there! 56 / 84 the way there! 57 / 84 the way there! 58 / 84 the way there! 59 / 84 the way there! 60 / 84 the way there! 61 / 84 the way there! 62 / 84 the way there! 63 / 84 the way there! 64 / 84 the way there! 65 / 84 the way there! 66 / 84 the way there! 67 / 84 the way there! 68 / 84 the way there! 69 / 84 the way there! 70 / 84 the way there! 71 / 84 the way there! 72 / 84 the way there! 73 / 84 the way there! 74 / 84 the way there! 75 / 84 the way there! 76 / 84 the way there! 77 / 84 the way there! 78 / 84 the way there! 79 / 84 the way there! 80 / 84 the way there! 81 / 84 the way there! 82 / 84 the way there! 83 / 84 the way there! 84 / 84 the way there! successful completion elapsed time (sec): 1166.5499 Sat Oct 15 12:28:44 PDT 2011 rec.crg solvmap_sev 1.60,1.65,1.90,1.90,1.90,1.60 1.4 2 box 1.4 EOI # receptor file # output grid file # radii of oxygen, nitrogen, carbon, sulfur, phosphorus, and "other" atoms. # radius of probe # grid resolution # box file # born radius of ligand atom