usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 27.49828 6.8076 63.14
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1829
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 967
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 965
Number of spheres polar: 312, nonpolar: 489, out of current total: 965
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.51029 37.45208 -3.13064 16.71304 53.20597 73.10421
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 548
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 470
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 423
Spheres center of coords (x y z): 26.8334706855792 9.90029704491725 61.54515321513
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.52321942327095
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 25