usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 1.97048148148148 29.0693333333333 8.64788888888889
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1583
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 951
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 951
Number of spheres polar: 326, nonpolar: 441, out of current total: 951
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.97593 11.54944 19.08908 39.06886 -1.34496 18.64177
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 499
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 417
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 356
Spheres center of coords (x y z): 2.58032514044944 26.0102464887641 9.03558320224719
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.53785368947975
Final number of output spheres is: 60
Number of polar spheres: 30
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 27