usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 1.48316 27.17972 8.1044
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1494
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 851
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 849
Number of spheres polar: 285, nonpolar: 376, out of current total: 849
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -8.47053 11.46754 17.24990 37.16738 -1.87100 18.10239
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 275
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 222
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 181
Spheres center of coords (x y z): 2.53896939226519 23.7064420994475 8.86557502762431
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.88511383724333
Final number of output spheres is: 45
Number of polar spheres: 17
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 25