usefragsph not on
There are 30 ligand heavy atoms
Ligand center of coords (x y z): 1.96986666666667 27.5588 8.82486666666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1564
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 956
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 928
Number of spheres polar: 284, nonpolar: 429, out of current total: 928
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.92617 11.47424 17.59708 37.51972 -1.12428 18.78420
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 533
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 460
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 386
Spheres center of coords (x y z): 0.801776424870466 25.2858075129533 9.92595632124353
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.99700995191045
Final number of output spheres is: 60
Number of polar spheres: 37
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 30