There are 14 ligand heavy atoms Ligand center of coords (x y z): -3.77064285714286 -12.1679285714286 -17.9501428571429 useligsph not on Starting number of spheres from sph/sph cluster 0: 435 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 386 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 386 Number of spheres polar: 138, nonpolar: 198, out of current total: 386 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.13911 7.77540 -24.10199 -0.83968 -25.54478 -5.96730 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 120 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 99 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -3.77064285714286 -12.1679285714286 -17.9501428571429 Center point: 72 xyz: -3.88560 -12.22708 -17.92028 After continuity checking, number of spheres is: 53 Final number of output spheres is: 53 Number of polar spheres: 7 Number of nonpolar spheres: 29 Number of spheres that are near neither polar nor nonpolar receptor atoms: 17 Final number of spheres that are from crystallographic ligand: 0