usefragsph not on
There are 14 ligand heavy atoms
Ligand center of coords (x y z): -3.77064285714286 -12.1679285714286 -17.9501428571429
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 435
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 282
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 282
Number of spheres polar: 83, nonpolar: 153, out of current total: 282
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.50562 6.16636 -22.06226 -2.17574 -25.54478 -9.39152
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 142
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 121
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 88
Spheres center of coords (x y z): -2.98891681818182 -12.1440252272727 -20.4163770454545
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.68639199140697
Final number of output spheres is: 60
Number of polar spheres: 8
Number of nonpolar spheres: 43
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 14