usefragsph not on
There are 14 ligand heavy atoms
Ligand center of coords (x y z): -3.96028571428571 -12.1099285714286 -17.9162857142857
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 387
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 268
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 268
Number of spheres polar: 78, nonpolar: 138, out of current total: 268
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.19503 5.90726 -21.99475 -2.20614 -25.30928 -9.00541
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 101
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 82
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 54
Spheres center of coords (x y z): -3.35393833333333 -12.4369553703704 -20.3758344444444
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.12760520589019
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 14