usefragsph not on
There are 40 ligand heavy atoms
Ligand center of coords (x y z): -2.954075 17.256025 13.94325
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1061
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 788
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 787
Number of spheres polar: 215, nonpolar: 465, out of current total: 787
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.92746 6.42706 7.27500 27.05723 5.13990 23.93578
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 236
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 208
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 193
Spheres center of coords (x y z): -4.78707352331606 16.7823103626943 14.6475093264249
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.19670822634029
Final number of output spheres is: 45
Number of polar spheres: 16
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 40