There are 25 ligand heavy atoms Ligand center of coords (x y z): 5.78268 27.77792 6.43264 useligsph not on Starting number of spheres from sph/sph cluster 0: 1193 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 974 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 969 Number of spheres polar: 365, nonpolar: 358, out of current total: 969 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.10963 17.76893 16.01514 39.76976 -5.53890 18.37391 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 362 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 292 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 5.78268 27.77792 6.43264 Center point: 39 xyz: 5.73391 27.94005 6.62005 After continuity checking, number of spheres is: 217 Spheres center of coords (x y z): 3.10491433179723 31.738529078341 4.59007115207374 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 12.7840285006196 27.3625683601817 0.675529946303173 Average weighted-distance for final elimination is: 29.322716437333 Final number of output spheres is: 120 Number of polar spheres: 42 Number of nonpolar spheres: 42 Number of spheres that are near neither polar nor nonpolar receptor atoms: 36 Final number of spheres that are from crystallographic ligand: 0