There are 36 ligand heavy atoms Ligand center of coords (x y z): 5.30283333333333 27.6114166666667 6.51175 useligsph not on Starting number of spheres from sph/sph cluster 0: 1210 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 790 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 780 Number of spheres polar: 190, nonpolar: 369, out of current total: 780 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.57804 17.26896 15.83040 39.57336 -5.48757 18.46745 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 333 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 258 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 5.30283333333333 27.6114166666667 6.51175 Center point: 41 xyz: 5.81766 27.76999 6.67741 After continuity checking, number of spheres is: 179 Spheres center of coords (x y z): 3.18281703910614 32.0416180446927 5.23408145251397 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 13.366761994003 27.0941592953523 0.671740629685155 Average weighted-distance for final elimination is: 29.7899405051981 Final number of output spheres is: 120 Number of polar spheres: 36 Number of nonpolar spheres: 44 Number of spheres that are near neither polar nor nonpolar receptor atoms: 40 Final number of spheres that are from crystallographic ligand: 0