There are 28 ligand heavy atoms Ligand center of coords (x y z): 7.05103571428572 30.2150357142857 9.30185714285714 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1277 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 840 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 812 Number of spheres polar: 187, nonpolar: 407, out of current total: 812 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.94044 19.04808 18.22877 42.16582 -2.65304 21.29673 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 375 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 275 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 7.05103571428572 30.2150357142857 9.30185714285714 Center point: 52 xyz: 7.37116 30.41611 9.48945 After continuity checking, number of spheres is: 183 Spheres center of coords (x y z): 4.18812202185793 33.5928724590164 10.1373110382514 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 13.7919312127237 27.9530580516899 1.27551411530815 Average weighted-distance for final elimination is: 30.4439864408267 Final number of output spheres is: 120 Number of polar spheres: 27 Number of nonpolar spheres: 44 Number of spheres that are near neither polar nor nonpolar receptor atoms: 49 Final number of spheres that are from crystallographic ligand: 0