Distance from surface specified: 1.80 There are 27 ligand heavy atoms Ligand center of coords (x y z): 20.172 -7.8282962962963 70.6185925925926 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 18707 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 14294 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 13969 Number of spheres polar: 7173, nonpolar: 5220, out of current total: 13969 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 6.17440 34.17140 -21.82820 6.16540 56.62900 84.61660 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 2127 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 962 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 931 Spheres center of coords (x y z): 22.1126373791622 -7.6529134264232 74.4165327604727 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 12.4137016820998 Final number of output spheres is: 200 Number of polar spheres: 140 Number of nonpolar spheres: 41 Number of spheres that are near neither polar nor nonpolar receptor atoms: 19 Final number of spheres that are from crystallographic ligand: 27