There are 28 ligand heavy atoms Ligand center of coords (x y z): 34.8863571428571 39.83675 73.0688214285714 useligsph not on Starting number of spheres from sph/sph cluster 0: 1173 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 947 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 928 Number of spheres polar: 293, nonpolar: 381, out of current total: 928 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 24.66356 46.88602 27.99101 51.79586 61.26147 85.05114 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 364 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 284 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 34.8863571428571 39.83675 73.0688214285714 Center point: 232 xyz: 34.14685 39.46200 72.90701 After continuity checking, number of spheres is: 227 Spheres center of coords (x y z): 32.9396762995595 41.5621739647577 74.5816412334801 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 44.2866323024055 39.0072714776633 68.3225297823598 Average weighted-distance for final elimination is: 31.176017849388 Final number of output spheres is: 120 Number of polar spheres: 44 Number of nonpolar spheres: 41 Number of spheres that are near neither polar nor nonpolar receptor atoms: 35 Final number of spheres that are from crystallographic ligand: 0