usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 34.8863571428571 39.83675 73.0688214285714
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1173
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 736
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 721
Number of spheres polar: 205, nonpolar: 311, out of current total: 721
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 25.10213 44.59127 29.98300 49.81302 63.08983 82.96084
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 405
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 368
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 346
Spheres center of coords (x y z): 33.4065358381503 39.7734376878613 74.316464132948
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.72652089984876
Final number of output spheres is: 60
Number of polar spheres: 16
Number of nonpolar spheres: 34
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 28