usefragsph not on
There are 41 ligand heavy atoms
Ligand center of coords (x y z): 8.08807317073171 22.0641463414634 16.4902682926829
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1981
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1038
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1037
Number of spheres polar: 242, nonpolar: 554, out of current total: 1037
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.89952 18.04585 12.06613 32.06217 6.55863 26.46205
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 371
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 312
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 268
Spheres center of coords (x y z): 8.0645956716418 22.7005225 17.4253091791045
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.13176165553176
Final number of output spheres is: 45
Number of polar spheres: 7
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 41