usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 6.75974193548387 -0.367322580645161 13.057064516129
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2062
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 943
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 943
Number of spheres polar: 177, nonpolar: 489, out of current total: 943
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 0.46354 16.64380 -10.36717 9.59398 3.07276 23.04881
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 348
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 286
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 266
Spheres center of coords (x y z): 9.31297462406016 -0.995314548872179 11.3610831203008
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.24206541020218
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 31