usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 49.4697586206897 34.1334827586207 -6.52234482758621
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2533
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 903
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 903
Number of spheres polar: 302, nonpolar: 425, out of current total: 903
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 39.47410 59.42102 24.18643 44.02169 -16.51177 3.31936
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 304
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 256
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 225
Spheres center of coords (x y z): 50.6498108 32.3134761333334 -9.63656577777778
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.42071876922585
Final number of output spheres is: 45
Number of polar spheres: 16
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 29